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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813172.1_cds_XP_016497447.1_11570
CDS Infomation

[gene=LOC107816262] [db_xref=GeneID:107816262] [protein=hydroxyproline O-galactosyltransferase HPGT1-like] [partial=5'] [protein_id=XP_016497447.1] [location=complement(join(3499..3521,4578..4690,4898..4969,6820..6870,6974..7061,8004..8127,8509..8581,8699..8762,9019..9212,9313..9362,10005..>10100))] [gbkey=CDS]
Sequence

ATTGTGGCAACTGGTAAATGCGTAATTGACAGGTTGTGGCTGGACTCTGAGAATAGGGTA
TATCTTATTGAAGAGCTTGATAGGAGAACGGGACAGGGCCATTCGGCAATATCAGTAGAT
GATACATTGAAGATCATAACCTGCAGGGAACAACAGAAGAGGCTAGCTGCACTTCAGACA
GAGCTTGGAAAAGCCAGTCAGGAAGGTTTTGTATCGAAGAATCTATTGGATAACAGTGAG
AGGGATTCAAAGAAAAAGCTTCTAGCTGTTGTAGGTGTCTCAACAAATTTTGGCAACAAA
AAGAACAGAGATGCGATCCGCAAAGCATGGATGCCTACTGGTGCTGCTCTTAAAAAATTA
GAGGAGGAGAAAGGTATAGTAATACGATTCGTCATAGGAAGAAGTTCAAGTCGCGGAGAC
AGTTCAGATAGAGCCATTGATGATGAGAGCAGGCGTTCCAATGACTTCATAATTATTAAT
GATCATGTGGAGTCCCCTCAAGAGCAAGCAAAAAAGACAAAGTTATTTTTCGTTCATGCT
GCTGAGAATTGGGATGCTGAGTTTTATGCCAAGGTCAACGACAATATCTATGTTAATATT
GATGCTGTTGGAGCCGTACTTGCCAGCCATTTGGATAAGCCTCGTGTTTACATAGGGTGT
ATGAAATCTGGCGAAGTCTTTTCACAGCCGGAAAACAAGTGGTATGAGCCAGAATGGTGG
AAATTTGGGGATGGAAAATCGTACTTCAGGCACGCTTCCGGTGAAATATTTGCGATATCA
AAGGCCTTAGCTCAATTCATTTCTATCAACAGATCAATACTTCGCACATATGCTCATGAT
GATGTGAGTGCTGGATCCTGGTTCATCGGCCTTGATGTGAAGCACGTTGATGAAGGGAAG
TTCTGCTGTGCTTCCTGGTCATCAGGGTCTGTATGCGCAGCAGCTTGA

Peptide Sequence

PEP ID

XP_016497447.1
PEP Infomation

PREDICTED: hydroxyproline O-galactosyltransferase HPGT1-like, partial [Nicotiana tabacum]
Sequence

IVATGKCVIDRLWLDSENRVYLIEELDRRTGQGHSAISVDDTLKIITCREQQKRLAALQT
ELGKASQEGFVSKNLLDNSERDSKKKLLAVVGVSTNFGNKKNRDAIRKAWMPTGAALKKL
EEEKGIVIRFVIGRSSSRGDSSDRAIDDESRRSNDFIIINDHVESPQEQAKKTKLFFVHA
AENWDAEFYAKVNDNIYVNIDAVGAVLASHLDKPRVYIGCMKSGEVFSQPENKWYEPEWW
KFGDGKSYFRHASGEIFAISKALAQFISINRSILRTYAHDDVSAGSWFIGLDVKHVDEGK
FCCASWSSGSVCAAA

Transcript Sequence

Gene sequence data has not been registered.